Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein aaex | DIZ31_06030 | Not Available | Negative | 1180269 - 1180472 | 7847.01 |
| hth-type transcriptional activator aaer | DIZ31_06035 | Not Available | Positive | 1180655 - 1181584 | 34518.1 |
| metalloprotease tldd | DIZ31_06040 | Not Available | Negative | 1181706 - 1183151 | 51366.2 |
| asma2 domain-containing protein | DIZ31_06045 | Not Available | Negative | 1183307 - 1187107 | 138948.0 |
| ribonuclease e/g | DIZ31_06050 | Not Available | Negative | 1187175 - 1188644 | 55367.4 |
| septum formation inhibitor maf | DIZ31_06055 | Not Available | Negative | 1188634 - 1189227 | 21414.6 |
| rod shape-determining protein mred | DIZ31_06060 | Not Available | Negative | 1189236 - 1189724 | 18788.9 |
| rod shape-determining protein mrec | DIZ31_06065 | Not Available | Negative | 1189724 - 1190827 | 39590.9 |
| rod shape-determining protein | DIZ31_06070 | Not Available | Negative | 1190893 - 1191936 | 36954.7 |
| hypothetical protein | DIZ31_06075 | Not Available | Positive | 1191914 - 1192096 | 6771.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





