Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-l-glycero-d-mannoheptose-6-epimerase | DIZ31_05190 | Not Available | Positive | 1036962 - 1037894 | 34896.0 |
| adp-heptose--lps heptosyltransferase | DIZ31_05195 | Not Available | Positive | 1037904 - 1038950 | 39030.4 |
| lps heptosyltransferase 1 | DIZ31_05200 | Not Available | Positive | 1038954 - 1039913 | 35575.8 |
| o-antigen ligase family protein | DIZ31_05205 | Not Available | Positive | 1039923 - 1041188 | 47114.7 |
| lipopolysaccharide 1,2-n-acetylglucosaminetransferase | DIZ31_05210 | Not Available | Negative | 1041214 - 1042251 | 40028.4 |
| chromosome partition protein mukb | DIZ31_05215 | Not Available | Negative | 1042252 - 1044882 | 100032.0 |
| chromosome partition protein muke | DIZ31_05220 | Not Available | Negative | 1044882 - 1045586 | 26949.0 |
| chromosome partition protein mukf | DIZ31_05225 | Not Available | Negative | 1045567 - 1046889 | 50609.8 |
| trna uridine 5-oxyacetic acid(34) methyltransferase cmom | DIZ31_05230 | Not Available | Negative | 1046886 - 1047671 | 29779.9 |
| envelope biogenesis factor elyc | DIZ31_05235 | Not Available | Positive | 1047807 - 1048586 | 28668.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





