Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diketo-l-gulonate trap transporter small permease yiam | DIZ31_04980 | Not Available | Positive | 989343 - 989810 | 17270.7 |
| 2,3-diketo-l-gulonate transporter large permease yian | DIZ31_04985 | Not Available | Positive | 989615 - 991090 | 52995.3 |
| trap transporter substrate-binding protein | DIZ31_04990 | Not Available | Positive | 991103 - 992089 | 36041.2 |
| carbohydrate kinase | DIZ31_04995 | Not Available | Positive | 992093 - 993589 | 55184.0 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | DIZ31_05000 | Not Available | Positive | 993586 - 994248 | 23521.1 |
| l-ribulose-5-phosphate 3-epimerase | DIZ31_05005 | Not Available | Positive | 994241 - 995101 | 32478.9 |
| l-ribulose-5-phosphate 4-epimerase | DIZ31_05010 | Not Available | Positive | 995095 - 995790 | 25570.5 |
| arac family transcriptional regulator | DIZ31_05015 | Not Available | Negative | 995822 - 996637 | 31521.1 |
| mfs transporter | DIZ31_05020 | Not Available | Positive | 996863 - 998263 | 51528.1 |
| hypothetical protein | DIZ31_05025 | Not Available | Positive | 998274 - 1000247 | 75333.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





