Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | DIZ31_04880 | Not Available | Negative | 966608 - 968677 | 76817.2 |
| glycine--trna ligase subunit alpha | DIZ31_04885 | Not Available | Negative | 968687 - 969598 | 34718.2 |
| hypothetical protein | DIZ31_04890 | Not Available | Negative | 969693 - 969992 | 11316.8 |
| acyltransferase | DIZ31_04895 | Not Available | Positive | 970167 - 971162 | 37641.2 |
| hypothetical protein | DIZ31_04900 | Not Available | Negative | 971204 - 971641 | 16115.6 |
| hypothetical protein | DIZ31_04905 | Not Available | Negative | 971687 - 972028 | 12523.9 |
| xylulokinase | DIZ31_04910 | Not Available | Negative | 972197 - 973651 | 52671.4 |
| xylose isomerase | DIZ31_04915 | Not Available | Negative | 973722 - 975044 | 49721.7 |
| d-xylose abc transporter substrate-binding protein | DIZ31_04920 | Not Available | Positive | 975410 - 976402 | 35722.1 |
| d-xylose abc transporter atp-binding protein | DIZ31_04925 | Not Available | Positive | 976480 - 978021 | 56488.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





