Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-3-methyladenine glycosylase i | DIZ31_04830 | Not Available | Positive | 957331 - 957894 | 21057.2 |
| n-acetyltransferase | DIZ31_04835 | Not Available | Positive | 957891 - 958331 | 17103.7 |
| trimethylamine-n-oxide reductase tora | DIZ31_04840 | Not Available | Negative | 958300 - 960633 | 85910.3 |
| ompa family lipoprotein | DIZ31_04845 | Not Available | Positive | 960786 - 961445 | 22228.6 |
| glyoxylate/hydroxypyruvate reductase ghrb | DIZ31_04850 | Not Available | Positive | 961549 - 962523 | 35439.6 |
| duf3053 domain-containing protein | DIZ31_04855 | Not Available | Negative | 962573 - 963283 | 25664.5 |
| transcriptional regulator | DIZ31_04860 | Not Available | Positive | 963717 - 964007 | 11033.5 |
| cold-shock protein | DIZ31_04865 | Not Available | Positive | 964288 - 964500 | 7403.66 |
| hok/gef family protein | DIZ31_04870 | Not Available | Negative | 964688 - 964840 | 6025.63 |
| is3-like element is150 family transposase | DIZ31_04875 | Not Available | Negative | 964941 - 966310 | 53107.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





