Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DIZ31_04775 | Not Available | Negative | 946271 - 947275 | 37551.7 |
| dipeptide abc transporter atp-binding protein | DIZ31_04780 | Not Available | Negative | 947272 - 948255 | 35803.5 |
| peptide abc transporter permease | DIZ31_04785 | Not Available | Negative | 948266 - 949168 | 32310.5 |
| peptide abc transporter permease | DIZ31_04790 | Not Available | Negative | 949178 - 950197 | 37499.4 |
| periplasmic dipeptide transporter | DIZ31_04800 | Not Available | Negative | 950504 - 952111 | 60296.9 |
| Trna-pro | Not Available | Not Available | Positive | 952855 - 952931 | Not Available |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | DIZ31_04810 | Not Available | Negative | 953023 - 954714 | 63864.0 |
| oxalate/formate antiport family mfs transporter | DIZ31_04815 | Not Available | Negative | 955038 - 956246 | 42887.4 |
| hypothetical protein | DIZ31_04820 | Not Available | Positive | 956240 - 956419 | 6641.22 |
| autotransporter outer membrane beta-barrel domain-containing protein | DIZ31_04825 | Not Available | Negative | 956475 - 957173 | 25932.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





