Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l36 | DIZ31_04655 | Not Available | Positive | 931032 - 931172 | 5466.94 |
| hypothetical protein | DIZ31_04665 | Not Available | Negative | 931494 - 931676 | 6289.97 |
| hypothetical protein | DIZ31_04670 | Not Available | Positive | 931579 - 931803 | 8447.39 |
| helix-turn-helix transcriptional regulator | DIZ31_04675 | Not Available | Positive | 932208 - 932798 | 23300.1 |
| common pilus major fimbrillin subunit ecpa | DIZ31_04680 | Not Available | Positive | 932873 - 933460 | 20082.4 |
| fimbrial chaperone ecpb | DIZ31_04685 | Not Available | Positive | 933517 - 934185 | 24502.3 |
| usher protein ecpc | DIZ31_04690 | Not Available | Positive | 934211 - 936736 | 91327.7 |
| fimbria adhesin ecpd | DIZ31_04695 | Not Available | Positive | 936726 - 938369 | 59937.1 |
| fimbrial chaperone ecpe | DIZ31_04700 | Not Available | Positive | 938338 - 939048 | 26621.7 |
| ykgj family cysteine cluster protein | DIZ31_04705 | Not Available | Positive | 939355 - 939684 | 11830.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





