Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | DIZ31_04545 | Not Available | Positive | 909451 - 909648 | 7287.95 |
| hypothetical protein | DIZ31_04550 | Not Available | Positive | 909555 - 909767 | 8008.56 |
| lactate utilization protein c | DIZ31_04555 | Not Available | Negative | 909722 - 910417 | 25110.1 |
| iron-sulfur cluster-binding protein | DIZ31_04560 | Not Available | Negative | 910410 - 911837 | 52985.8 |
| (fe-s)-binding protein | DIZ31_04565 | Not Available | Negative | 911848 - 912567 | 26036.8 |
| arac family transcriptional regulator | DIZ31_04570 | Not Available | Negative | 913093 - 913947 | 31510.3 |
| pyridine nucleotide-disulfide oxidoreductase | DIZ31_04575 | Not Available | Positive | 914174 - 915499 | 48229.1 |
| duf1471 domain-containing protein | DIZ31_04580 | Not Available | Positive | 915608 - 915844 | 8459.25 |
| protein rclc | DIZ31_04585 | Not Available | Positive | 915856 - 916449 | 21914.7 |
| aldo/keto reductase | DIZ31_04590 | Not Available | Negative | 916609 - 917493 | 33217.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





