Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine abc transporter substrate-binding protein | DIZ31_04280 | Not Available | Negative | 852608 - 853570 | 34303.9 |
| transcriptional regulator | DIZ31_04285 | Not Available | Positive | 853876 - 854151 | 10318.3 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | DIZ31_04290 | Not Available | Positive | 854186 - 855295 | 39307.1 |
| s-formylglutathione hydrolase frmb | DIZ31_04295 | Not Available | Positive | 855388 - 856221 | 31421.1 |
| duf2058 domain-containing protein | DIZ31_04300 | Not Available | Negative | 856346 - 856885 | 19953.9 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | DIZ31_04305 | Not Available | Negative | 856987 - 858198 | 41615.5 |
| 4-hydroxy-2-oxovalerate aldolase | DIZ31_04310 | Not Available | Negative | 858374 - 859387 | 36398.6 |
| acetaldehyde dehydrogenase (acetylating) | DIZ31_04315 | Not Available | Negative | 859384 - 860334 | 33458.5 |
| 2-keto-4-pentenoate hydratase | DIZ31_04320 | Not Available | Negative | 860331 - 861140 | 28849.5 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | DIZ31_04325 | Not Available | Negative | 861150 - 862016 | 31939.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





