Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ31_04180 | Not Available | Positive | 834110 - 835042 | 34498.2 |
| Trna-arg | Not Available | Not Available | Positive | 835118 - 835192 | Not Available |
| duf4102 domain-containing protein | DIZ31_04190 | Not Available | Positive | 835353 - 836528 | 44699.0 |
| hypothetical protein | DIZ31_04195 | Not Available | Negative | 836508 - 837458 | 35485.5 |
| hypothetical protein | DIZ31_04200 | Not Available | Negative | 837480 - 838361 | 34017.1 |
| hypothetical protein | DIZ31_04205 | Not Available | Negative | 838926 - 839048 | 4632.93 |
| d-alanine--d-alanine ligase | DIZ31_04210 | Not Available | Positive | 839126 - 840220 | 39343.1 |
| duf2754 domain-containing protein | DIZ31_04215 | Not Available | Negative | 840244 - 840456 | 8097.92 |
| hypothetical protein | DIZ31_04220 | Not Available | Positive | 840455 - 840643 | 7206.84 |
| duf2755 domain-containing protein | DIZ31_04225 | Not Available | Positive | 840716 - 841024 | 11425.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





