Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane usher protein | DIZ31_04130 | Not Available | Negative | 822826 - 825474 | 97303.2 |
| fimbrial protein | DIZ31_04135 | Not Available | Negative | 825555 - 826121 | 19878.4 |
| phosphohistidine phosphatase sixa | DIZ31_04140 | Not Available | Negative | 826680 - 827165 | 17242.9 |
| fatty acid oxidation complex subunit alpha fadj | DIZ31_04145 | Not Available | Negative | 827368 - 829512 | 77187.0 |
| acetyl-coa c-acyltransferase fadi | DIZ31_04150 | Not Available | Negative | 829512 - 830822 | 46559.4 |
| duf406 family protein | DIZ31_04155 | Not Available | Negative | 831003 - 831287 | 10318.2 |
| hypothetical protein | DIZ31_04160 | Not Available | Negative | 831372 - 831623 | 9136.99 |
| long-chain fatty acid transporter | DIZ31_04165 | Not Available | Positive | 831659 - 832999 | 48681.4 |
| phospholipid-binding lipoprotein mlaa | DIZ31_04170 | Not Available | Negative | 833061 - 833816 | 28039.2 |
| hypothetical protein | DIZ31_04175 | Not Available | Negative | 833842 - 834012 | 6071.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





