Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine abc transporter permease hisq | DIZ31_03980 | Not Available | Negative | 795551 - 796237 | 24664.9 |
| histidine abc transporter substrate-binding protein hisj | DIZ31_03985 | Not Available | Negative | 796327 - 797109 | 28484.9 |
| lysine/arginine/ornithine abc transporter substrate-binding protein argt | DIZ31_03990 | Not Available | Negative | 797330 - 798112 | 27973.1 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | DIZ31_03995 | Not Available | Negative | 798378 - 798947 | 20682.2 |
| amidophosphoribosyltransferase | DIZ31_04000 | Not Available | Negative | 799042 - 800559 | 56533.4 |
| colicin v production protein | DIZ31_04005 | Not Available | Negative | 800596 - 801084 | 17991.0 |
| cell division protein dedd | DIZ31_04010 | Not Available | Negative | 801525 - 802187 | 22971.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | DIZ31_04015 | Not Available | Negative | 802177 - 803445 | 45439.2 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | DIZ31_04020 | Not Available | Negative | 803515 - 804429 | 33323.9 |
| deda family protein | DIZ31_04025 | Not Available | Negative | 804585 - 805244 | 24647.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





