Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug transporter subunit mdtj | DIZ31_03630 | Not Available | Positive | 726331 - 726696 | 13115.7 |
| spermidine export protein mdti | DIZ31_03635 | Not Available | Positive | 726683 - 727012 | 11720.8 |
| serine protease | DIZ31_03640 | Not Available | Negative | 727051 - 727872 | 29250.6 |
| hypothetical protein | DIZ31_03645 | Not Available | Negative | 727972 - 728055 | 3206.2 |
| acid shock protein | DIZ31_03650 | Not Available | Negative | 728148 - 728483 | 11579.1 |
| mfs transporter | DIZ31_03655 | Not Available | Negative | 728880 - 730133 | 45220.2 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit b | DIZ31_03660 | Not Available | Positive | 730246 - 730568 | 11122.1 |
| anaerobic glycerol-3-phosphate dehydrogenase subunit c | DIZ31_03665 | Not Available | Positive | 730565 - 731755 | 44182.5 |
| isncy family transposase | DIZ31_03670 | Not Available | Positive | 731948 - 732943 | 38396.0 |
| hypothetical protein | DIZ31_03675 | Not Available | Positive | 732956 - 733177 | 8220.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





