Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mal regulon transcriptional regulator mali | DIZ31_03520 | Not Available | Positive | 700826 - 701854 | 36608.9 |
| 7-alpha-hydroxysteroid dehydrogenase | DIZ31_03525 | Not Available | Positive | 701966 - 702733 | 26837.2 |
| tetr family transcriptional regulator | DIZ31_03530 | Not Available | Positive | 702962 - 703552 | 21800.5 |
| beta-glucuronidase | DIZ31_03535 | Not Available | Positive | 703942 - 705753 | 68475.7 |
| duf945 domain-containing protein | DIZ31_03550 | Not Available | Negative | 708472 - 709980 | 54668.2 |
| mannose-6-phosphate isomerase | DIZ31_03555 | Not Available | Negative | 710081 - 711256 | 42768.3 |
| fumarate hydratase | DIZ31_03560 | Not Available | Positive | 711455 - 713101 | 60248.9 |
| class ii fumarate hydratase | DIZ31_03565 | Not Available | Positive | 713244 - 714647 | 50434.8 |
| dna replication terminus site-binding protein | DIZ31_03570 | Not Available | Negative | 714644 - 715573 | 35825.2 |
| two-component system sensor histidine kinase rstb | DIZ31_03575 | Not Available | Negative | 715649 - 716950 | 49230.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





