Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxine/pyridoxamine 5'-phosphate oxidase | DIZ31_03415 | Not Available | Positive | 681800 - 682456 | 25546.6 |
| tyrosine--trna ligase | DIZ31_03420 | Not Available | Positive | 682585 - 683859 | 47529.6 |
| pyridoxal kinase | DIZ31_03425 | Not Available | Positive | 683918 - 684781 | 31336.0 |
| glutathione s-transferase | DIZ31_03430 | Not Available | Negative | 684825 - 685430 | 22869.6 |
| dipeptide and tripeptide permease a | DIZ31_03435 | Not Available | Negative | 685536 - 687038 | 54042.4 |
| hypothetical protein | DIZ31_03440 | Not Available | Negative | 687321 - 687521 | 7952.87 |
| endonuclease iii | DIZ31_03445 | Not Available | Negative | 687649 - 688284 | 23579.7 |
| electron transporter rsxe | DIZ31_03450 | Not Available | Negative | 688284 - 688979 | 24462.6 |
| electron transport complex subunit rsxg | DIZ31_03455 | Not Available | Negative | 688983 - 689603 | 21890.1 |
| electron transport complex subunit d | DIZ31_03460 | Not Available | Negative | 689607 - 690665 | 38177.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





