Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1289 domain-containing protein | DIZ31_03365 | Not Available | Positive | 673887 - 674126 | 9389.18 |
| aldo/keto reductase family oxidoreductase | DIZ31_03370 | Not Available | Positive | 674175 - 675071 | 33605.5 |
| superoxide dismutase | DIZ31_03375 | Not Available | Positive | 675152 - 675673 | 17649.9 |
| fusc family protein | DIZ31_03380 | Not Available | Negative | 675674 - 677686 | 75387.1 |
| hlyd family secretion protein | DIZ31_03385 | Not Available | Negative | 677686 - 678543 | 31527.6 |
| duf1656 domain-containing protein | DIZ31_03390 | Not Available | Negative | 678546 - 678782 | 8905.36 |
| slya family transcriptional regulator | DIZ31_03395 | Not Available | Positive | 678983 - 679417 | 16381.1 |
| outer membrane lipoprotein slyb | DIZ31_03400 | Not Available | Negative | 679464 - 679931 | 15628.7 |
| anhydro-n-acetylmuramic acid kinase | DIZ31_03405 | Not Available | Positive | 680205 - 681314 | 39512.7 |
| c-type lysozyme inhibitor | DIZ31_03410 | Not Available | Positive | 681412 - 681741 | 12572.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





