Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NGE-016 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1223980 bp
Thymine Count
1220313 bp
Guanine Count
1256252 bp
Cytosine Count
1252374 bp
Genome Length
4952920 bp
Protein-coding Genes
4684 genes
Non-Coding Genes
368 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Host-nuclease inhibitor protein gam | DIZ31_10255 | Not Available | Positive | 2018904 - 2019200 | 11603.5 |
| Recombination protein bet | DIZ31_10260 | Not Available | Positive | 2019206 - 2019991 | 29720.3 |
| Exonuclease | DIZ31_10265 | Not Available | Positive | 2019988 - 2020668 | 25914.9 |
| Hypothetical protein | DIZ31_10270 | Not Available | Positive | 2020665 - 2020847 | 6795.36 |
| Hypothetical protein | DIZ31_10275 | Not Available | Positive | 2020820 - 2021011 | 6990.34 |
| Hypothetical protein | DIZ31_10280 | Not Available | Positive | 2021022 - 2021303 | 10391.7 |
| Hypothetical protein | DIZ31_10285 | Not Available | Positive | 2021402 - 2021623 | 8296.03 |
| Orf6 | DIZ31_10290 | Not Available | Positive | 2021623 - 2021949 | 12840.2 |
| Hypothetical protein | DIZ31_10295 | Not Available | Positive | 2021933 - 2022172 | 9493.43 |
| excisionase | DIZ31_10300 | Not Available | Positive | 2022312 - 2022548 | 8845.89 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





