Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 14-391 716 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391573 bp
Thymine Count
1400172 bp
Guanine Count
1421990 bp
Cytosine Count
1420986 bp
Genome Length
5634721 bp
Protein-coding Genes
5756 genes
Non-Coding Genes
338 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee atpase escn | DIV22_19835 | Not Available | Positive | 3660784 - 3662124 | 48879.3 |
| type iii secretion system lee atpase activity positive regulator esco | DIV22_19840 | Not Available | Positive | 3662127 - 3662504 | 14659.6 |
| duf1106 domain-containing protein | DIV22_19845 | Not Available | Positive | 3662497 - 3662913 | 16348.6 |
| type iii secretion system protein sepq | DIV22_19850 | Not Available | Positive | 3662876 - 3663793 | 34971.9 |
| secretion protein esph | DIV22_19855 | Not Available | Positive | 3663824 - 3664339 | 19561.3 |
| tir chaperone family protein | DIV22_19860 | Not Available | Negative | 3664558 - 3664917 | 13781.4 |
| t3ss effector protein map | DIV22_19865 | Not Available | Positive | 3665168 - 3665779 | 22643.2 |
| translocated intimin receptor tir | DIV22_19870 | Not Available | Positive | 3666226 - 3667842 | 55424.1 |
| type iii secretion system lee chaperone cest | DIV22_19875 | Not Available | Positive | 3667975 - 3668445 | 17721.9 |
| intimin | DIV22_19880 | Not Available | Positive | 3668506 - 3671325 | 101690.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





