Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ygdi/ygdr family lipoprotein | DIZ28_03760 | Not Available | Positive | 780938 - 781165 | 8174.67 |
| transcriptional regulator gcva | DIZ28_03765 | Not Available | Positive | 781516 - 782433 | 34369.4 |
| duf423 domain-containing protein | DIZ28_03770 | Not Available | Positive | 782452 - 782847 | 14334.0 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | DIZ28_03775 | Not Available | Positive | 782840 - 783940 | 41937.5 |
| l-fucose operon activator | DIZ28_03780 | Not Available | Negative | 783984 - 784715 | 27363.7 |
| l-fucose mutarotase | DIZ28_03785 | Not Available | Negative | 784773 - 785195 | 15474.0 |
| l-fuculokinase | DIZ28_03790 | Not Available | Negative | 785197 - 786615 | 52261.7 |
| l-fucose isomerase | DIZ28_03795 | Not Available | Negative | 786724 - 788499 | 64980.3 |
| l-fucose-proton symporter | DIZ28_03800 | Not Available | Negative | 788532 - 789848 | 47547.6 |
| l-fuculose-phosphate aldolase | DIZ28_03805 | Not Available | Positive | 790395 - 791042 | 23786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





