Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin-like protein yhak | DIZ28_18375 | Not Available | Negative | 3666575 - 3667276 | 25897.0 |
| lysr family transcriptional regulator | DIZ28_18380 | Not Available | Positive | 3667381 - 3667806 | 15693.0 |
| fatty acid oxidation complex subunit alpha fadb | DIZ28_18385 | Not Available | Positive | 3667807 - 3669623 | 66134.4 |
| acetyl-coa c-acyltransferase fada | DIZ28_18390 | Not Available | Positive | 3669633 - 3670796 | 40871.7 |
| nad(p)h-flavin reductase | DIZ28_18395 | Not Available | Negative | 3670988 - 3671689 | 26243.5 |
| 3-octaprenyl-4-hydroxybenzoate decarboxylase | DIZ28_18400 | Not Available | Negative | 3671735 - 3673228 | 55606.8 |
| transcription/translation regulatory transformer protein rfah | DIZ28_18405 | Not Available | Positive | 3673395 - 3673883 | 18371.3 |
| 3'-5' ssdna/rna exonuclease tatd | DIZ28_18410 | Not Available | Negative | 3673880 - 3674662 | 29056.6 |
| twin-arginine translocase subunit tatc | DIZ28_18415 | Not Available | Negative | 3674704 - 3675480 | 28877.9 |
| sec-independent protein translocase tatb | DIZ28_18420 | Not Available | Negative | 3675483 - 3675998 | 18464.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





