Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein ygap | DIZ28_17355 | Not Available | Negative | 3473349 - 3473873 | 18658.9 |
| transcriptional regulator | DIZ28_17360 | Not Available | Negative | 3473883 - 3474182 | 10596.9 |
| yqae/pmp3 family membrane protein | DIZ28_17365 | Not Available | Positive | 3474365 - 3474523 | 5865.57 |
| peptidoglycan-binding protein lysm | DIZ28_17370 | Not Available | Positive | 3474607 - 3475056 | 16036.9 |
| transcriptional regulator | DIZ28_17375 | Not Available | Negative | 3475057 - 3475719 | 24964.3 |
| gaba permease | DIZ28_17380 | Not Available | Negative | 3475740 - 3477140 | 51069.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | DIZ28_17385 | Not Available | Negative | 3477558 - 3478838 | 45643.3 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | DIZ28_17390 | Not Available | Negative | 3478852 - 3480300 | 51806.1 |
| l-2-hydroxyglutarate oxidase | DIZ28_17395 | Not Available | Negative | 3480323 - 3481591 | 46014.6 |
| carbon starvation induced protein csid | DIZ28_17400 | Not Available | Negative | 3481610 - 3482587 | 37323.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





