Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | DIZ28_16660 | Not Available | Negative | 3322412 - 3323500 | 39828.5 |
| duf421 domain-containing protein | DIZ28_16665 | Not Available | Negative | 3323699 - 3324367 | 25284.3 |
| cation/acetate symporter actp | DIZ28_16670 | Not Available | Negative | 3324720 - 3326369 | 59244.8 |
| hypothetical protein | DIZ28_16675 | Not Available | Negative | 3326366 - 3326680 | 11672.3 |
| acetate--coa ligase | DIZ28_16680 | Not Available | Negative | 3326881 - 3328839 | 72069.4 |
| hypothetical protein | DIZ28_16685 | Not Available | Positive | 3328950 - 3329135 | 7236.26 |
| ammonia-forming cytochrome c nitrite reductase subunit c552 | DIZ28_16690 | Not Available | Positive | 3329232 - 3330668 | 53705.7 |
| cytochrome c-type protein nrfb | DIZ28_16695 | Not Available | Positive | 3330713 - 3331279 | 20715.6 |
| protein nrfc | DIZ28_16700 | Not Available | Positive | 3331276 - 3331947 | 24538.7 |
| protein nrfd | DIZ28_16705 | Not Available | Positive | 3331944 - 3332900 | 35044.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





