Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ycar | DIZ28_16610 | Not Available | Negative | 3310311 - 3310493 | 6855.35 |
| winged helix-turn-helix domain-containing protein | DIZ28_16615 | Not Available | Negative | 3310545 - 3311777 | 47602.5 |
| tetraacyldisaccharide 4'-kinase | DIZ28_16620 | Not Available | Negative | 3311814 - 3312800 | 35595.3 |
| lipid a export atp-binding/permease msba | DIZ28_16625 | Not Available | Negative | 3312797 - 3314545 | 64464.6 |
| comec family protein | DIZ28_16630 | Not Available | Negative | 3314582 - 3316846 | 84583.1 |
| integration host factor subunit beta | DIZ28_16635 | Not Available | Negative | 3317053 - 3317337 | 10651.8 |
| 30s ribosomal protein s1 | DIZ28_16640 | Not Available | Negative | 3317497 - 3319170 | 61161.5 |
| cytidylate kinase | DIZ28_16645 | Not Available | Negative | 3319281 - 3319964 | 24747.8 |
| metalloprotease | DIZ28_16650 | Not Available | Negative | 3320137 - 3320889 | 26360.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | DIZ28_16655 | Not Available | Negative | 3321058 - 3322341 | 46094.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





