Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2884 domain-containing protein | DIZ28_16100 | Not Available | Positive | 3206849 - 3207568 | 26430.8 |
| l-asparaginase 2 | DIZ28_16105 | Not Available | Positive | 3207744 - 3208790 | 36852.7 |
| duf1202 domain-containing protein | DIZ28_16110 | Not Available | Positive | 3208907 - 3209914 | 38504.4 |
| yggw family oxidoreductase | DIZ28_16115 | Not Available | Negative | 3210157 - 3211293 | 42546.6 |
| non-canonical purine ntp pyrophosphatase | DIZ28_16120 | Not Available | Negative | 3211286 - 3211879 | 20993.9 |
| yggu family protein | DIZ28_16125 | Not Available | Negative | 3211887 - 3212177 | 10429.8 |
| yggt family protein | DIZ28_16130 | Not Available | Negative | 3212174 - 3212740 | 21168.5 |
| yggs family pyridoxal phosphate-dependent enzyme | DIZ28_16135 | Not Available | Negative | 3212758 - 3213462 | 25802.9 |
| type iv pilus twitching motility protein pilt | DIZ28_16140 | Not Available | Positive | 3213480 - 3214460 | 35923.3 |
| holliday junction resolvase ruvx | DIZ28_16145 | Not Available | Negative | 3214644 - 3215060 | 15173.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





