Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtw domain-containing protein | DIZ28_16040 | Not Available | Positive | 3197315 - 3198013 | 25982.4 |
| protein lysine acetyltransferase | DIZ28_16045 | Not Available | Positive | 3198045 - 3200705 | 97893.1 |
| phosphatidylserine synthase | DIZ28_16050 | Not Available | Positive | 3200819 - 3202174 | 52776.8 |
| lipoprotein | DIZ28_16055 | Not Available | Positive | 3202220 - 3202543 | 11805.9 |
| alpha-ketoglutarate permease | DIZ28_16060 | Not Available | Negative | 3202540 - 3203838 | 47055.3 |
| alpha-ketoglutarate permease | DIZ28_16065 | Not Available | Negative | 3203820 - 3203933 | 4337.44 |
| a/g-specific adenine glycosylase | DIZ28_16080 | Not Available | Negative | 3204486 - 3205459 | 36549.0 |
| adenine glycosylase | DIZ28_16085 | Not Available | Negative | 3205413 - 3205550 | 4915.0 |
| trna (guanosine(46)-n7)-methyltransferase trmb | DIZ28_16090 | Not Available | Positive | 3205620 - 3206339 | 27308.9 |
| duf469 domain-containing protein | DIZ28_16095 | Not Available | Positive | 3206339 - 3206665 | 12881.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





