Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | DIZ28_15990 | Not Available | Positive | 3188688 - 3190310 | 60261.8 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | DIZ28_15995 | Not Available | Negative | 3190295 - 3191032 | 27197.4 |
| atp-dependent rna helicase srmb | DIZ28_16000 | Not Available | Positive | 3191164 - 3192498 | 49901.0 |
| lysr family transcriptional regulator | DIZ28_16005 | Not Available | Negative | 3192531 - 3193412 | 33364.3 |
| cysteine/o-acetylserine transporter | DIZ28_16010 | Not Available | Positive | 3193515 - 3194102 | 21321.6 |
| autonomous glycyl radical cofactor grca | DIZ28_16015 | Not Available | Negative | 3194158 - 3194541 | 14269.0 |
| uracil-dna glycosylase | DIZ28_16020 | Not Available | Positive | 3194846 - 3195535 | 25682.6 |
| trna/rrna methyltransferase | DIZ28_16025 | Not Available | Negative | 3195583 - 3196620 | 37800.5 |
| hypothetical protein | DIZ28_16030 | Not Available | Negative | 3196610 - 3196813 | 7646.15 |
| thiol disulfide reductase thioredoxin | DIZ28_16035 | Not Available | Positive | 3196827 - 3197246 | 15555.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





