Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein reco | DIZ28_15940 | Not Available | Negative | 3180008 - 3180736 | 27350.1 |
| gtpase era | DIZ28_15945 | Not Available | Negative | 3180748 - 3181653 | 33812.1 |
| ribonuclease 3 | DIZ28_15950 | Not Available | Negative | 3181650 - 3182330 | 25551.6 |
| hypothetical protein | DIZ28_15955 | Not Available | Positive | 3182274 - 3182552 | 10125.3 |
| s26 family signal peptidase | DIZ28_15960 | Not Available | Negative | 3182603 - 3183577 | 35948.3 |
| elongation factor 4 | DIZ28_15965 | Not Available | Negative | 3183593 - 3185392 | 66588.1 |
| soxr reducing system protein rsec | DIZ28_15970 | Not Available | Negative | 3185590 - 3186069 | 16626.3 |
| sigma-e factor regulatory protein rseb | DIZ28_15975 | Not Available | Negative | 3186066 - 3187022 | 35751.8 |
| anti-sigma-e factor rsea | DIZ28_15980 | Not Available | Negative | 3187022 - 3187672 | 24322.8 |
| ecf rna polymerase sigma-e factor | DIZ28_15985 | Not Available | Negative | 3187705 - 3188280 | 21697.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





