Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf494 domain-containing protein | DIZ28_15885 | Not Available | Positive | 3174718 - 3175191 | 18484.2 |
| hypothetical protein | DIZ28_15890 | Not Available | Positive | 3175220 - 3175762 | 19845.9 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | DIZ28_15895 | Not Available | Positive | 3175767 - 3176339 | 20641.7 |
| shikimate dehydrogenase | DIZ28_15900 | Not Available | Positive | 3176344 - 3177162 | 29399.3 |
| duf1488 domain-containing protein | DIZ28_15905 | Not Available | Positive | 3177159 - 3177416 | 9977.52 |
| gamma carbonic anhydrase family protein | DIZ28_15910 | Not Available | Negative | 3177392 - 3178162 | 28376.6 |
| small toxic protein shob | DIZ28_15915 | Not Available | Negative | 3178384 - 3178464 | 3075.16 |
| hypothetical protein | DIZ28_15920 | Not Available | Negative | 3178461 - 3178625 | 5979.21 |
| holo-acp synthase | DIZ28_15930 | Not Available | Negative | 3178885 - 3179265 | 14125.2 |
| pyridoxine 5'-phosphate synthase | DIZ28_15935 | Not Available | Negative | 3179265 - 3179996 | 26385.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





