Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | DIZ28_15635 | Not Available | Negative | 3147821 - 3148321 | 19143.0 |
| prgh/eprh family type iii secretion apparatus protein | DIZ28_15640 | Not Available | Positive | 3148570 - 3149760 | 45542.1 |
| type iii secretion system needle complex protein | DIZ28_15645 | Not Available | Positive | 3149773 - 3150012 | 9038.44 |
| hypothetical protein | DIZ28_15650 | Not Available | Positive | 3150032 - 3150364 | 12299.7 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | DIZ28_15655 | Not Available | Positive | 3150361 - 3151095 | 27595.7 |
| type iii secretion apparatus protein orga/mxik | DIZ28_15660 | Not Available | Positive | 3151111 - 3151692 | 22722.8 |
| hypothetical protein | DIZ28_15665 | Not Available | Positive | 3151685 - 3152010 | 12681.7 |
| elongation factor tu | DIZ28_15670 | Not Available | Positive | 3152011 - 3152143 | 4476.66 |
| ferredoxin | DIZ28_15675 | Not Available | Negative | 3152245 - 3152391 | 5412.18 |
| bacterioferritin-associated ferredoxin | DIZ28_15680 | Not Available | Positive | 3152326 - 3152520 | 7475.27 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





