Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54-dependent fis family transcriptional regulator | DIZ28_15510 | Not Available | Positive | 3125401 - 3127179 | 66114.0 |
| xanthine dehydrogenase iron-sulfur-binding subunit | DIZ28_15515 | Not Available | Negative | 3127219 - 3127698 | 16922.7 |
| xanthine dehydrogenase fad-binding subunit xdhb | DIZ28_15520 | Not Available | Negative | 3127695 - 3128573 | 31602.6 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | DIZ28_15525 | Not Available | Negative | 3128584 - 3130881 | 82663.0 |
| lysm peptidoglycan-binding domain-containing protein | DIZ28_15535 | Not Available | Positive | 3131297 - 3132052 | 26540.0 |
| Trna-gly | Not Available | Not Available | Positive | 3132131 - 3132204 | Not Available |
| hypothetical protein | DIZ28_15545 | Not Available | Positive | 3132396 - 3134048 | 62241.0 |
| ghot/ortt family toxin | DIZ28_15550 | Not Available | Positive | 3134115 - 3134294 | 6642.54 |
| arac family transcriptional regulator | DIZ28_15555 | Not Available | Positive | 3134640 - 3135389 | 28312.4 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | DIZ28_15560 | Not Available | Positive | 3135386 - 3137089 | 62739.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





