Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylesterase | DIZ28_15250 | Not Available | Positive | 3068224 - 3068850 | 23623.5 |
| short-chain dehydrogenase/reductase | DIZ28_15255 | Not Available | Positive | 3068840 - 3069649 | 29412.0 |
| co-chaperone ybbn | DIZ28_15260 | Not Available | Positive | 3069710 - 3070507 | 29678.4 |
| atp-dependent rna helicase rhle | DIZ28_15265 | Not Available | Negative | 3072361 - 3073725 | 50008.4 |
| transcriptional regulator | DIZ28_15270 | Not Available | Positive | 3073954 - 3074625 | 25018.1 |
| secretion protein hlyd | DIZ28_15275 | Not Available | Positive | 3074625 - 3075623 | 36434.9 |
| abc transporter atp-binding protein | DIZ28_15280 | Not Available | Positive | 3075616 - 3077352 | 63163.3 |
| inner membrane transport permease ybhs | DIZ28_15285 | Not Available | Positive | 3077345 - 3078478 | 42062.4 |
| inner membrane transport permease ybhr | DIZ28_15290 | Not Available | Positive | 3078489 - 3079595 | 41568.2 |
| hypothetical protein | DIZ28_15295 | Not Available | Negative | 3079557 - 3079967 | 15435.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





