Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | DIZ28_15195 | Not Available | Negative | 3052700 - 3053476 | 29357.0 |
| glyoxylate carboligase | DIZ28_15200 | Not Available | Negative | 3053489 - 3055270 | 64763.6 |
| transcriptional regulator | DIZ28_15205 | Not Available | Negative | 3055360 - 3056175 | 29271.4 |
| ureidoglycolate lyase | DIZ28_15210 | Not Available | Negative | 3056253 - 3056735 | 18223.6 |
| hth-type transcriptional activator alls | DIZ28_15215 | Not Available | Positive | 3056965 - 3057891 | 34612.8 |
| trna 2-selenouridine(34) synthase mnmh | DIZ28_15220 | Not Available | Positive | 3057960 - 3059054 | 41046.1 |
| hypothetical protein | DIZ28_15230 | Not Available | Negative | 3060056 - 3060547 | 18488.3 |
| rhs element protein | DIZ28_15235 | Not Available | Negative | 3060528 - 3064730 | 157244.0 |
| abc transporter permease | DIZ28_15240 | Not Available | Negative | 3065159 - 3067573 | 89267.5 |
| abc transporter atp-binding protein | DIZ28_15245 | Not Available | Negative | 3067570 - 3068256 | 24534.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





