Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | DIZ28_15095 | Not Available | Negative | 3031320 - 3032141 | 28795.4 |
| non-specific ribonucleoside hydrolase rihc | DIZ28_15100 | Not Available | Negative | 3032308 - 3033222 | 32584.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DIZ28_15105 | Not Available | Negative | 3033288 - 3034238 | 34776.6 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | DIZ28_15110 | Not Available | Negative | 3034240 - 3034689 | 16081.9 |
| lipoprotein signal peptidase | DIZ28_15115 | Not Available | Negative | 3034777 - 3035271 | 18129.3 |
| isoleucine--trna ligase | DIZ28_15120 | Not Available | Negative | 3035271 - 3038087 | 104302.0 |
| bifunctional riboflavin kinase/fmn adenylyltransferase | DIZ28_15125 | Not Available | Negative | 3038130 - 3039071 | 34736.4 |
| duf2575 domain-containing protein | DIZ28_15130 | Not Available | Negative | 3039079 - 3039297 | 8080.04 |
| 30s ribosomal protein s20 | DIZ28_15135 | Not Available | Positive | 3039400 - 3039663 | 9684.94 |
| pentapeptide repeat-containing protein | DIZ28_15140 | Not Available | Positive | 3040133 - 3041554 | 55852.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





