Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-carnitine/gamma-butyrobetaine antiporter | DIZ28_15045 | Not Available | Positive | 3018552 - 3020066 | 56608.4 |
| crotonobetainyl-coa dehydrogenase | DIZ28_15050 | Not Available | Positive | 3020097 - 3021239 | 42560.8 |
| l-carnitine coa-transferase | DIZ28_15055 | Not Available | Positive | 3021368 - 3022585 | 45071.2 |
| atp-dependent acyl-coa ligase | DIZ28_15060 | Not Available | Positive | 3022659 - 3024212 | 58587.4 |
| crotonobetainyl-coa hydratase | DIZ28_15065 | Not Available | Positive | 3024321 - 3025106 | 28172.8 |
| carnitine operon protein caie | DIZ28_15070 | Not Available | Positive | 3025112 - 3025702 | 21201.6 |
| transcriptional activatory protein caif | DIZ28_15075 | Not Available | Negative | 3025821 - 3026216 | 15437.1 |
| hypothetical protein | DIZ28_15080 | Not Available | Positive | 3026251 - 3026469 | 8212.92 |
| carbamoyl-phosphate synthase large chain | DIZ28_15085 | Not Available | Negative | 3026477 - 3029698 | 117863.0 |
| carbamoyl-phosphate synthase small subunit | DIZ28_15090 | Not Available | Negative | 3029716 - 3030864 | 41433.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





