Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component-system connector protein safa | DIZ28_14210 | Not Available | Negative | 2861404 - 2861601 | 7328.15 |
| putative oxidoreductase | DIZ28_14215 | Not Available | Negative | 2861849 - 2864128 | 83463.8 |
| fimbrial protein | DIZ28_14220 | Not Available | Negative | 2864462 - 2865376 | 32013.3 |
| type 1 fimbrial protein | DIZ28_14225 | Not Available | Negative | 2865436 - 2865939 | 18147.4 |
| type 1 fimbrial protein | DIZ28_14230 | Not Available | Negative | 2865952 - 2866482 | 18921.6 |
| fimbrial biogenesis outer membrane usher protein | DIZ28_14235 | Not Available | Negative | 2866496 - 2869147 | 96678.3 |
| fimbrial chaperone protein fimc | DIZ28_14240 | Not Available | Negative | 2869189 - 2869908 | 26504.2 |
| fimbrial protein | DIZ28_14245 | Not Available | Negative | 2870260 - 2870823 | 19172.6 |
| arac family transcriptional regulator | DIZ28_14255 | Not Available | Negative | 2871257 - 2871511 | 10039.1 |
| type ii toxin-antitoxin system hipa family toxin | DIZ28_14260 | Not Available | Negative | 2871797 - 2873119 | 49365.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





