Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase dacd | DIZ28_14110 | Not Available | Positive | 2841791 - 2842957 | 43319.5 |
| dna gyrase inhibitor sbmc | DIZ28_14115 | Not Available | Positive | 2843076 - 2843549 | 18054.3 |
| fusc family protein | DIZ28_14120 | Not Available | Positive | 2843748 - 2844806 | 39957.7 |
| duf496 domain-containing protein | DIZ28_14125 | Not Available | Positive | 2844978 - 2845307 | 12778.5 |
| propanediol utilization protein | DIZ28_14130 | Not Available | Negative | 2845408 - 2845683 | 9812.87 |
| cobalamin biosynthesis protein | DIZ28_14135 | Not Available | Positive | 2845683 - 2846042 | 12992.3 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DIZ28_14140 | Not Available | Positive | 2846176 - 2846721 | 20106.1 |
| adenosylcobinamide-gdp ribazoletransferase | DIZ28_14145 | Not Available | Positive | 2846718 - 2847461 | 26397.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DIZ28_14150 | Not Available | Positive | 2847473 - 2848552 | 36951.2 |
| l,d-transpeptidase | DIZ28_14155 | Not Available | Positive | 2848617 - 2849549 | 34369.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





