Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | DIZ28_14055 | Not Available | Negative | 2832378 - 2833682 | 46224.0 |
| atp phosphoribosyltransferase | DIZ28_14060 | Not Available | Negative | 2833688 - 2834587 | 33382.8 |
| his operon leader peptide | DIZ28_14070 | Not Available | Negative | 2834733 - 2834783 | 2081.43 |
| nad(p)-dependent oxidoreductase | DIZ28_14075 | Not Available | Positive | 2835210 - 2836034 | 29681.7 |
| lysr family transcriptional regulator | DIZ28_14080 | Not Available | Positive | 2836080 - 2837009 | 34186.0 |
| membrane protein yoei | DIZ28_14085 | Not Available | Positive | 2837224 - 2837286 | 2241.66 |
| low-affinity putrescine importer plap | DIZ28_14090 | Not Available | Positive | 2837276 - 2838634 | 49540.5 |
| yeee/yede family protein | DIZ28_14095 | Not Available | Positive | 2838813 - 2839871 | 38058.6 |
| hypothetical protein | DIZ28_14100 | Not Available | Positive | 2839885 - 2840112 | 8092.61 |
| exodeoxyribonuclease i | DIZ28_14105 | Not Available | Negative | 2840155 - 2841582 | 54475.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





