Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | DIZ28_13600 | Not Available | Negative | 2748118 - 2748780 | 25098.2 |
| abc transporter atp-binding protein | DIZ28_13605 | Not Available | Positive | 2748889 - 2749815 | 34649.2 |
| inner membrane transport permease yadh | DIZ28_13610 | Not Available | Positive | 2749812 - 2750582 | 28517.9 |
| pts sugar transporter subunit iia | DIZ28_13615 | Not Available | Positive | 2750687 - 2751127 | 16527.0 |
| polysaccharide deacetylase family protein | DIZ28_13620 | Not Available | Positive | 2751191 - 2752420 | 46370.9 |
| aspartate 1-decarboxylase | DIZ28_13625 | Not Available | Negative | 2752424 - 2752804 | 13834.5 |
| hypothetical protein | DIZ28_13630 | Not Available | Positive | 2752754 - 2752957 | 7615.25 |
| hypothetical protein | DIZ28_13635 | Not Available | Negative | 2752897 - 2753097 | 7597.5 |
| rpn family recombination-promoting nuclease/putative transposase | DIZ28_13640 | Not Available | Positive | 2753078 - 2753950 | 33739.8 |
| hypothetical protein | DIZ28_13645 | Not Available | Positive | 2754019 - 2754228 | 8236.79 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





