Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3300 domain-containing protein | DIZ28_13550 | Not Available | Negative | 2735518 - 2737371 | 69224.5 |
| aconitate hydratase | DIZ28_13555 | Not Available | Positive | 2737629 - 2737745 | 4750.45 |
| aconitate hydratase b | DIZ28_13560 | Not Available | Positive | 2737726 - 2740323 | 93489.4 |
| upf0231 family protein | DIZ28_13565 | Not Available | Positive | 2740498 - 2740860 | 13942.3 |
| s-adenosylmethionine decarboxylase proenzyme | DIZ28_13570 | Not Available | Negative | 2740898 - 2741692 | 30386.3 |
| polyamine aminopropyltransferase | DIZ28_13575 | Not Available | Negative | 2741708 - 2742574 | 32367.2 |
| hypothetical protein | DIZ28_13580 | Not Available | Negative | 2742680 - 2743027 | 12854.4 |
| multicopper oxidase cueo | DIZ28_13585 | Not Available | Positive | 2743193 - 2744743 | 56688.7 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | DIZ28_13590 | Not Available | Negative | 2744945 - 2747335 | 86782.1 |
| hypoxanthine phosphoribosyltransferase | DIZ28_13595 | Not Available | Positive | 2747541 - 2748077 | 20116.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





