Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | DIZ28_13045 | Not Available | Positive | 2636719 - 2637441 | 26557.0 |
| ribonucleoside-diphosphate reductase subunit alpha | DIZ28_13060 | Not Available | Positive | 2642030 - 2644315 | 85753.0 |
| ribonucleoside-diphosphate reductase 1 subunit beta | DIZ28_13065 | Not Available | Positive | 2644549 - 2645679 | 43519.6 |
| ferredoxin | DIZ28_13070 | Not Available | Positive | 2645679 - 2645933 | 9293.29 |
| hypothetical protein | DIZ28_13075 | Not Available | Negative | 2645987 - 2646637 | 25285.5 |
| mfs transporter | DIZ28_13080 | Not Available | Negative | 2646718 - 2647908 | 42908.2 |
| sensor domain-containing phosphodiesterase | DIZ28_13090 | Not Available | Positive | 2648402 - 2650645 | 85623.8 |
| exopolyphosphatase | DIZ28_13095 | Not Available | Negative | 2650684 - 2652225 | 58121.4 |
| polyphosphate kinase | DIZ28_13100 | Not Available | Negative | 2652230 - 2654296 | 80436.1 |
| phosphoribosylglycinamide formyltransferase | DIZ28_13105 | Not Available | Negative | 2654468 - 2655106 | 23239.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





