Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate coa-transferase subunit alpha | DIZ28_12995 | Not Available | Positive | 2620599 - 2621261 | 23550.9 |
| coa transferase subunit b | DIZ28_13000 | Not Available | Positive | 2621261 - 2621911 | 22908.0 |
| short-chain fatty acids transporter | DIZ28_13005 | Not Available | Positive | 2621908 - 2623230 | 47530.6 |
| acetyl-coa c-acetyltransferase | DIZ28_13010 | Not Available | Positive | 2623261 - 2624445 | 40376.0 |
| duf2135 domain-containing protein | DIZ28_13015 | Not Available | Negative | 2624519 - 2625295 | 28286.2 |
| duf2300 domain-containing protein | DIZ28_13020 | Not Available | Negative | 2625300 - 2626949 | 61483.2 |
| hypothetical protein | DIZ28_13025 | Not Available | Negative | 2626950 - 2631554 | 169902.0 |
| duf1175 domain-containing protein | DIZ28_13030 | Not Available | Negative | 2631488 - 2632111 | 23868.6 |
| duf2138 domain-containing protein | DIZ28_13035 | Not Available | Negative | 2632108 - 2633796 | 62764.8 |
| dna gyrase subunit a | DIZ28_13040 | Not Available | Negative | 2633945 - 2636572 | 96983.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





