Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyribodipyrimidine photo-lyase | DIZ28_12895 | Not Available | Negative | 2596678 - 2598096 | 53607.8 |
| duf1722 domain-containing protein | DIZ28_12900 | Not Available | Negative | 2598093 - 2598602 | 20285.4 |
| duf2517 domain-containing protein | DIZ28_12905 | Not Available | Negative | 2598703 - 2598909 | 8275.0 |
| potassium-transporting atpase subunit f | DIZ28_12910 | Not Available | Positive | 2599221 - 2599310 | 3071.95 |
| potassium-transporting atpase subunit kdpa | DIZ28_12915 | Not Available | Positive | 2599310 - 2600983 | 59135.7 |
| k(+)-transporting atpase subunit b | DIZ28_12920 | Not Available | Positive | 2601006 - 2603054 | 72268.6 |
| k(+)-transporting atpase subunit c | DIZ28_12925 | Not Available | Positive | 2603063 - 2603635 | 20338.4 |
| hypothetical protein | DIZ28_12930 | Not Available | Positive | 2603628 - 2604220 | 21755.1 |
| microcin j25 efflux abc transporter yoji | DIZ28_12935 | Not Available | Negative | 2604221 - 2605758 | 57659.9 |
| dna oxidative demethylase alkb | DIZ28_12940 | Not Available | Negative | 2605834 - 2606484 | 24064.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





