Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1328 domain-containing protein | DIZ28_00475 | Not Available | Positive | 114257 - 114436 | 6238.2 |
| patatin family protein | DIZ28_00480 | Not Available | Positive | 114558 - 115631 | 39834.1 |
| metal-dependent hydrolase | DIZ28_00485 | Not Available | Positive | 115628 - 116410 | 28972.8 |
| yjjw family glycine radical enzyme activase | DIZ28_00490 | Not Available | Negative | 116624 - 117487 | 31518.3 |
| yjji family glycine radical enzyme | DIZ28_00495 | Not Available | Negative | 117459 - 119009 | 57989.3 |
| 2-deoxyribose-5-phosphate aldolase | DIZ28_00500 | Not Available | Positive | 119267 - 120046 | 27749.3 |
| thymidine phosphorylase | DIZ28_00505 | Not Available | Positive | 120173 - 121495 | 47182.9 |
| phosphopentomutase | DIZ28_00510 | Not Available | Positive | 121547 - 122770 | 44372.4 |
| purine-nucleoside phosphorylase | DIZ28_00515 | Not Available | Positive | 122827 - 123546 | 25937.4 |
| xre family transcriptional regulator | DIZ28_00520 | Not Available | Negative | 123707 - 123970 | 10042.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





