Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-tyrosine-phosphatase | DIZ28_12305 | Not Available | Positive | 2481640 - 2482086 | 16386.9 |
| tyrosine-protein kinase etk | DIZ28_12310 | Not Available | Positive | 2482106 - 2484286 | 81264.5 |
| phytase appa | DIZ28_12315 | Not Available | Negative | 2484406 - 2485710 | 47344.8 |
| cytochrome bd-ii oxidase subunit cbdx | DIZ28_12320 | Not Available | Negative | 2485790 - 2485882 | 3597.68 |
| cytochrome d ubiquinol oxidase subunit ii | DIZ28_12325 | Not Available | Negative | 2485895 - 2487031 | 42454.4 |
| cytochrome bd-ii oxidase subunit 1 | DIZ28_12330 | Not Available | Negative | 2487043 - 2488587 | 58012.3 |
| hydrogenase expression/formation protein | DIZ28_12335 | Not Available | Negative | 2488721 - 2489578 | 31431.5 |
| hydrogenase-1 operon protein hyae | DIZ28_12340 | Not Available | Negative | 2489575 - 2489973 | 14950.7 |
| hydrogenase 1 maturation protease | DIZ28_12345 | Not Available | Negative | 2489970 - 2490557 | 21532.7 |
| ni/fe-hydrogenase b-type cytochrome subunit | DIZ28_12350 | Not Available | Negative | 2490554 - 2491261 | 27598.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





