Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | DIZ28_12050 | Not Available | Positive | 2432959 - 2434347 | 49359.4 |
| sis domain-containing protein | DIZ28_12055 | Not Available | Positive | 2434368 - 2435390 | 38639.4 |
| endonuclease | DIZ28_12060 | Not Available | Positive | 2435353 - 2435487 | 5040.0 |
| fructoselysine 3-epimerase | DIZ28_12065 | Not Available | Positive | 2435441 - 2436268 | 30931.3 |
| fructoselysine 6-kinase | DIZ28_12070 | Not Available | Positive | 2436268 - 2437053 | 28337.4 |
| transcriptional regulator | DIZ28_12075 | Not Available | Positive | 2437153 - 2437884 | 27822.2 |
| tryptophan--trna ligase | DIZ28_12080 | Not Available | Negative | 2438015 - 2439019 | 37439.9 |
| phosphoglycolate phosphatase | DIZ28_12085 | Not Available | Negative | 2439012 - 2439770 | 27348.7 |
| ribulose-phosphate 3-epimerase | DIZ28_12090 | Not Available | Negative | 2439763 - 2440440 | 24555.7 |
| adenine-specific dna-methyltransferase | DIZ28_12095 | Not Available | Negative | 2440458 - 2441294 | 32087.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





