Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate synthase component 2 | DIZ28_12000 | Not Available | Negative | 2423357 - 2423920 | 20746.0 |
| adenosine monophosphate-protein transferase | DIZ28_12005 | Not Available | Negative | 2423952 - 2424554 | 22961.4 |
| duf2559 domain-containing protein | DIZ28_12010 | Not Available | Negative | 2424544 - 2424711 | 6668.12 |
| peptidylprolyl isomerase a | DIZ28_12015 | Not Available | Negative | 2424816 - 2425388 | 20432.5 |
| mfs transporter | DIZ28_12020 | Not Available | Positive | 2425659 - 2426840 | 43110.9 |
| nitrite reductase large subunit | DIZ28_12025 | Not Available | Positive | 2427102 - 2429645 | 93112.6 |
| nitrite reductase small subunit | DIZ28_12030 | Not Available | Positive | 2429642 - 2429968 | 12284.7 |
| nitrite transporter nirc | DIZ28_12035 | Not Available | Positive | 2430094 - 2430900 | 28578.2 |
| siroheme synthase | DIZ28_12040 | Not Available | Positive | 2430919 - 2432292 | 49954.4 |
| duf4223 domain-containing protein | DIZ28_12045 | Not Available | Positive | 2432547 - 2432714 | 5819.16 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





