Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DIZ28_11900 | Not Available | Positive | 2405481 - 2406026 | 20877.7 |
| aminoacyl-trna hydrolase | DIZ28_11905 | Not Available | Positive | 2406023 - 2406445 | 15572.8 |
| copper homeostasis/adhesion lipoprotein nlpe | DIZ28_11910 | Not Available | Positive | 2406459 - 2407169 | 25829.7 |
| n1pc/p60 superfamily peptidases | DIZ28_11915 | Not Available | Negative | 2407369 - 2408193 | 30076.2 |
| proline--trna ligase | DIZ28_11920 | Not Available | Negative | 2408246 - 2409964 | 63626.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | DIZ28_11925 | Not Available | Negative | 2410075 - 2410782 | 26333.8 |
| rcs stress response system protein rcsf | DIZ28_11930 | Not Available | Negative | 2410779 - 2411183 | 14164.3 |
| methionine abc transporter substrate-binding protein metq | DIZ28_11935 | Not Available | Negative | 2411301 - 2412116 | 29433.3 |
| methionine abc transporter | DIZ28_11940 | Not Available | Negative | 2412156 - 2412809 | 23257.6 |
| methionine import atp-binding protein metn | DIZ28_11945 | Not Available | Negative | 2412802 - 2413833 | 37804.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





