Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deoxyguanosinetriphosphate triphosphohydrolase | DIZ28_11745 | Not Available | Positive | 2371405 - 2372922 | 59388.2 |
| periplasmic serine endoprotease degp | DIZ28_11755 | Not Available | Positive | 2373052 - 2374476 | 49357.3 |
| cdar family transcriptional regulator | DIZ28_11760 | Not Available | Positive | 2374631 - 2375788 | 43660.1 |
| duf3461 domain-containing protein | DIZ28_11765 | Not Available | Negative | 2375877 - 2376263 | 15097.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | DIZ28_11770 | Not Available | Negative | 2376577 - 2377401 | 29921.9 |
| bifunctional uridylyltransferase/uridylyl-removing protein | DIZ28_11775 | Not Available | Negative | 2377432 - 2380104 | 102379.0 |
| methionine aminopeptidase | DIZ28_11780 | Not Available | Negative | 2380166 - 2380960 | 29332.5 |
| hypothetical protein | DIZ28_11785 | Not Available | Negative | 2380960 - 2381181 | 8290.1 |
| 30s ribosomal protein s2 | DIZ28_11790 | Not Available | Positive | 2381328 - 2382053 | 26745.2 |
| elongation factor ts | DIZ28_11795 | Not Available | Positive | 2382188 - 2383039 | 30424.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





