Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | DIZ28_11640 | Not Available | Negative | 2351632 - 2352813 | 43023.4 |
| uroporphyrinogen-iii synthase | DIZ28_11645 | Not Available | Negative | 2352835 - 2353575 | 27799.5 |
| hydroxymethylbilane synthase | DIZ28_11650 | Not Available | Negative | 2353572 - 2354513 | 33867.0 |
| hypothetical protein | DIZ28_11655 | Not Available | Negative | 2354666 - 2354872 | 7971.76 |
| class i adenylate cyclase | DIZ28_11660 | Not Available | Positive | 2354900 - 2357446 | 97594.4 |
| iron donor protein cyay | DIZ28_11665 | Not Available | Negative | 2357486 - 2357806 | 12232.1 |
| hypothetical protein | DIZ28_11675 | Not Available | Positive | 2358270 - 2358473 | 7177.59 |
| diaminopimelate epimerase | DIZ28_11680 | Not Available | Positive | 2358510 - 2359334 | 30210.4 |
| duf484 domain-containing protein | DIZ28_11685 | Not Available | Positive | 2359331 - 2360038 | 26712.4 |
| tyrosine recombinase xerc | DIZ28_11690 | Not Available | Positive | 2360035 - 2360931 | 33811.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





