Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E-9 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1050001 bp
Thymine Count
1052755 bp
Guanine Count
1075150 bp
Cytosine Count
1076456 bp
Genome Length
4254362 bp
Protein-coding Genes
4037 genes
Non-Coding Genes
203 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin prlf | DIZ28_11365 | Not Available | Negative | 2302450 - 2302785 | 12359.7 |
| d-galactarate dehydratase | DIZ28_11370 | Not Available | Negative | 2302934 - 2304505 | 56376.9 |
| mfs transporter | DIZ28_11375 | Not Available | Positive | 2304880 - 2306214 | 48970.0 |
| 2-dehydro-3-deoxyglucarate aldolase | DIZ28_11380 | Not Available | Positive | 2306230 - 2307000 | 27472.7 |
| 2-hydroxy-3-oxopropionate reductase | DIZ28_11385 | Not Available | Positive | 2307030 - 2307920 | 30661.6 |
| glycerate 2-kinase | DIZ28_11390 | Not Available | Positive | 2308017 - 2309162 | 39064.6 |
| hypothetical protein | DIZ28_11400 | Not Available | Negative | 2309959 - 2310261 | 11868.3 |
| Trna-asp | Not Available | Not Available | Positive | 2310648 - 2310724 | Not Available |
| Trna-trp | Not Available | Not Available | Positive | 2310733 - 2310808 | Not Available |
| transcriptional regulator | DIZ28_11425 | Not Available | Negative | 2310904 - 2311743 | 31778.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





